pyRona Manual'
  • Introduction
  • Installation & dependencies
  • Method description
  • Usage

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  • Wrapping BayPass
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pyRona Manual'
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Citation

If you use pyRona, please cite our ~~pre-print~~ published paper:

~~New insights on adaptation and population structure of cork oak using genotyping by sequencing~~

New insights into adaptation and population structure of cork oak using genotyping by sequencing

And Rellstab et al. 2016.

If you used BayPass, please cite:

  • Gautier M. Genome-Wide Scan for Adaptive Differentiation and Association Analysis with population-specific covariables. Genetics, 201: 1555-1579.

If you used LFMM, please cite:

  • Frichot, E., Schoville, S. D., Bouchard, G., & François, O. (2013). Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models. Molecular Biology and Evolution, 30(7), 1687–1699.
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